BIOINFORMATICS CENTRE

Punjab Agricultural University

Welcome to the GAAP Software

GAAP is a genome assembly and annotation package designed to be run on multiple platforms. GAAP uses NCBI SRA for downloading the NGS data from NCBI. The software uses FastQC and Trimmomatics for data quality checking and pre-processing that will be further used by Velvet software for genome assembly. We also provide the annotation tool that will perform remote blast against nr database and interproscan for domain search. At the end, the results will be presented in a tabular form.

Download VacPred software from here:
1. For Windiw 64bit Click Here
2. For Linux 64bit Click Here
3. For Mac OS Click Here

News/Announement

  • Admission for M.Sc Biotechnology are open through GAT-B at School of Agricultural Biotechnology, PAU. Detail
  • Developed a database for plant disease susceptibility genesDetail
  • A review article on Genome engineering of disease susceptibility genes for enhancing resistance in plantsFunctional and Integrative GenomicsDetail
  • Developed a GUI software for Genome Assembly and Annotation.Detail
  • We are looking for researchers having expertise in Next Generation Data Analysis, Machine Learning, Database development and willing to apply for upcoming DST-NPDF Fellowship etc.
  • Assembled Mitochondrial Genome of Onion